NodePlate Heatmap Viewer

Visualizer

Creates trellis of heatMaps to explore your screen. By default nodes expects three columns to be present in order to reorder wells back into plates:
- barcode
- plateRow
- plateColumn

Supported microtiter plate formats:
6, 12, 24, 96, 384 and 1536. The viewer will try to make a guess about the proper plate dimension if not all wells are present in the table (e.g. because outer rows are not used).

Image data:
Tables containing images allow visualization of the well images in the well detail view. Any cell of an image data column will be visualized. So far the KNIME native PNG images are recognised, as well as the formats provided by the Image Processing plugin. Careful! the processing might take time and disk space. The best performance is achieved with the "Image Reference" produced by the "Image File Linker" node of the image processing plugin.

Input Ports

  1. Port Type: Data
    A table containing High Content Screening data.

Output Ports

  1. Port Type: Data
    Same as input table.
  2. Port Type: Image
    PNG image of the heatmap trellis containing all plates. It takes the first readout in the list, the default colormap and no overlay.