MSSimulator

Manipulator

A highly configurable simulator for mass spectrometry experiments.

Web Documentation for MSSimulator

Input Ports

  1. Type: URI Object Input protein sequences [FASTA]

Output Ports

  1. Type: URI Object output: simulated MS raw (profile) data [mzML,Inactive]
  2. Type: URI Object output: ground-truth picked (centroided) MS data [mzML,Inactive]
  3. Type: URI Object output: ground-truth features [featureXML,Inactive]
  4. Type: URI Object output: ground-truth features, grouping ESI charge variants of each parent peptide [consensusXML,Inactive]
  5. Type: URI Object output: ground-truth features, grouping labeled variants [consensusXML,Inactive]
  6. Type: URI Object output: ground-truth features caused by contaminants [featureXML,Inactive]
  7. Type: URI Object output: ground-truth MS2 peptide identifications [idXML,Inactive]

Find here

Community Nodes > OpenMS > Utilities

Make sure to have this extension installed:

OpenMS

Update site for KNIME Analytics Platform 3.7:
KNIME Community Contributions (3.7)

How to install extensions