NodeCometAdapter

Manipulator

Annotates MS/MS spectra using Comet.

Web Documentation for CometAdapter

Input ports

  1. in [mzML] Type: URI Object
    Input file [mzML]
  2. database [FASTA] Type: URI Object
    FASTA file [FASTA]
  3. default_params_file [txt] Type: URI Object
    Default Comet params file. All parameters of this take precedence. A template file can be generated using comet.exe -p [txt,opt.]

Output ports

  1. out [idXML] Type: URI Object
    Output file [idXML]
  2. pin_out [csv,Inactive] Type: URI Object
    Output file - for Percolator input [csv,Inactive]