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Protein Model Building

Prime

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Read an amino acid sequence, search for possible templates, look for relevant ones, build a homology model including the largest ligand and compare it to the template structure. Run a side chain sampling and a minimization of the binding site.

Used extensions & nodes

Created with KNIME Analytics Platform version 4.1.1 Note: Not all extensions may be displayed.
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    KNIME Core Trusted extension

    KNIME GmbH, Konstanz, Germany

    Version 3.4.0

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    Schrödinger Extensions for KNIME Trusted extension

    Schrödinger

    Version 20.3.114

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