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ChemAxon / Infocom JChem MOE Community Nodes Input Write KNIME Labs Semantic Web/Linked Data Vernalis
  1. Node / Source
    PDF Parser
    Other Data Types Text Processing IO
    This node allows you to read PDF documents and create a document for each file. The documents title and authors will be extracted…
    0
    knime
  2. Node / Sink
    Table to PDF
    IO Write
    This node allows you to generate PDF reports out of the given input data. The report, generated by the Birt reporting engine, sho…
    0
    knime
  3. Node / Source
    XPT Reader (Beta)
    Community Nodes Lhasa Limited Generic
    +1
    Read a SAS XPORT (XPT) encoded file as per the specification . This node is currently released as a beta.
    0
    lhasa-knime-developers
  4. Node / Source
    MolImporter
    ChemAxon / Infocom JChem IO
    +1
    The input file format is guessed automatically. Many different formats are supported like "mol", "rgf", "sdf", "rdf", "csmol", "c…
    0
    infocom
  5. Node / Source
    Multiple MolImporter
    ChemAxon / Infocom JChem IO
    +1
    The input file format is guessed automatically. Many different formats are supported like "mol", "rgf", "sdf", "rdf", "csmol", "c…
    0
    infocom
  6. Node / Sink
    Table to HTML
    IO Write
    This node allows you to generate HTML reports out of the given input data. The report, generated by the Birt reporting engine, sh…
    0
    knime
  7. Node / Visualizer
    Table to PDF (deprecated)
    IO Write
    This node allows you to generate PDF reports out of the given input data. The report, generated by the Birt reporting engine, sho…
    0
    knime
  8. Node / Source
    PDB Reader
    MOE IO Input
    +1
    Reads molecules from a .pdb or .ent file This node can access a variety of different file systems. More information about file ha…
    0
    guido_kirsten
  9. Node / Sink
    PDB Writer
    MOE IO Output
    +1
    This node takes all molecules in a certain column of the input table and writes them, each as a separate file, into a directory. …
    0
    guido_kirsten
  10. Node / Source
    Variable Based MolImporter (deprecated)
    ChemAxon / Infocom JChem IO
    The input file format is guessed automatically. Many different formats are supported like "mol", "rgf", "sdf", "rdf", "csmol", "c…
    0
    infocom
  11. Node / Visualizer
    Table to HTML (deprecated)
    IO Write
    This node allows you to generate HTML reports out of the given input data. The report, generated by the Birt reporting engine, sh…
    0
    knime
  12. Node / Source
    Load SD-Files (SDF)
    Community Nodes Vernalis IO
    +1
    Each sd-file is loaded and parsed such that one output row of the table contains the data for 1 compound in the sd-file. The node…
    0
    vernalis
  13. Node / Source
    Load Local PDB Files
    Community Nodes Vernalis IO
    +1
    Each pdb file is loaded into into a new table cell (1 file per row).
    0
    vernalis
  14. Node / Source
    Load FASTA Files
    Community Nodes Vernalis IO
    +1
    Each FASTA is loaded and parsed such that one output row of the table contains the data for 1 sequence in the file. The node atte…
    0
    vernalis
  15. Node / Source
    Multiple PdbImporter
    ChemAxon / Infocom JChem IO
    +1
    Imports biochemical data from PDB file.
    0
    infocom
  16. Node / Source
    PdbImporter
    ChemAxon / Infocom JChem IO
    +1
    Imports biochemical data from PDB file.
    0
    infocom
  17. Node / Source
    Get Molecule From Clipboard
    MOE IO Input
    Reads a single molecule from the clipboard. Supported formats are moe, mdlmol, mdlskc, mol2, pdb and smiles.
    0
    guido_kirsten
  18. Node / Sink
    MolExporter
    ChemAxon / Infocom JChem IO
    +1
    The output file format can be specified as a file extension. Many different output file formats are supported like "mol", "sdf", …
    0
    infocom
  19. Node / Sink
    Triple File Writer
    KNIME Labs Semantic Web/Linked Data IO
    This node writes all triples from a given data table into a file. The Namespace of the subject, predicate, object URIs can be cha…
    0
    knime
  20. Node / Source
    Read PDB (deprecated)
    MOE IO Input
    Read molecule in pdb format file
    0
    guido_kirsten