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Image segmentation
Image processing Image labeling HCS Bounding box Classification Label studio Phenotypes Cca Connected component analysis
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    Workflow
    Application: 3D Segmentation
    Image processing Image segmentation Image labeling
    This is an example workflow that illustrates 3D-Segmenation
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 02_Application_Tutorials > 15_3D_Segmentation > 12_3D_Segmentation
    1
    knime
  2. Go to item
    Workflow
    Feature Calculation
    Image processing Image segmentation Image features
    In this workflow the Feature Calculator Node is explained. This node can be applied on both entire images and image segmentations
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 01_Node_Tutorials > 06_Feature_Calculation
    1
    knime
  3. Go to item
    Workflow
    Application: Car Counting
    Image processing Image segmentation Image tracking
    This tutorial workflow demonstrates how to count the number of cars driving on a street, given a recording of the street.
    knime > Examples > 99_Community > 01_Image_Processing > 03_Applications > 04_Car_Counting
    1
    knime
  4. Go to item
    Workflow
    Bounding Box Creation & Display (XML Workflow)
    Label studio Bounding box Image segmentation
    +2
    This component was made to integrate with labelstudio bounding box download in xml format. This component takes in images and the…
    june__ > Object Detection > Bounding Box from XML Creator
    0
    june__
  5. Go to item
    Workflow
    Bounding Box from XML (Multiple)
    Bounding box Image segmentation Label studio
    This component was made to integrate with labelstudio bounding box download in xml format. This component takes in images and the…
    june__ > Object Detection > Bounding Box from XML (Multiple)
    0
    june__
  6. Go to item
    Workflow
    Nuclei Classification Trainig
    HCS Image segmentation Classification
    +1
    This workflow reads images from a high throughput experiment acquired with an Olympus ScanR Microscope. A subset of the image dat…
    manuel > Public > ImageProcessing > NucleiClassificationTraining
    0
    manuel
  7. Go to item
    Workflow
    Labeling Filter
    Image processing Image segmentation Image labeling
    This workflow explains the filtering of labels based on their properties. Generally, there are two common ways how this can be do…
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 01_Node_Tutorials > 08_Labeling_Filter
    0
    knime
  8. Go to item
    Workflow
    Application: Overlay RGB
    Image processing Image segmentation Image labeling
    This tutorial workflow shows how you may color your labeling according to some segment features and write it on disk as an RGB Im…
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 02_Application_Tutorials > 13_Overlay_RGB > 01_Overlay_RGB
    0
    knime
  9. Go to item
    Workflow
    Application: Watershed Segmentation
    Image processing Image segmentation Image labeling
    Segmentation of cells using the Watershed algorithm.
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 02_Application_Tutorials > 14_Watershed_Segmentation > 01_Watershed_Segmentation
    0
    knime
  10. Go to item
    Workflow
    Application: Find Seeds
    Image processing Image segmentation
    Find local maxima in the image that may be seeds for a segmentation.
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 02_Application_Tutorials > 10_Find_Seeds > 01_Find_Seeds
    0
    knime
  11. Go to item
    Workflow
    Application: Count Chromosomes
    Image processing Image segmentation
    This tutorial workflow demonstrates how to count the number of chromosomes.
    knime > Examples > 99_Community > 01_Image_Processing > 03_Applications > 05_Count_Chromosomes
    0
    knime
  12. Go to item
    Workflow
    Application: Intensity Measurement
    Image processing Image segmentation Image labeling
    This workflow demonstrates a statistical intensity measurement of a cell segmentation.
    knime > Examples > 99_Community > 01_Image_Processing > 03_Applications > 07_Intensity_Measurement
    0
    knime
  13. Go to item
    Workflow
    Nuclei Classification Trainig
    HCS Image segmentation Classification
    +1
    This workflow reads images from a high throughput experiment acquired with an Olympus ScanR Microscope. A subset of the image dat…
    manuel > Public > NucleiClassificationTraining_OMICS2020
    0
    manuel
  14. Go to item
    Workflow
    Basic Segmentation
    Image processing Image segmentation Connected component analysis
    +1
    This workflow shows how to do a very basic segmentation of a cell image and visually verify its results.
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 01_Node_Tutorials > 05_Basic_Segmentation
    0
    knime
  15. Go to item
    Workflow
    Cell Clump Splitter 2D
    Image processing Image segmentation Waehlby
    This workflow shows how to split segments that are actually separated in "world state" but were detected as single merged segment…
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 01_Node_Tutorials > 16_Cell_Clump_Splitter_2D
    0
    knime
  16. Go to item
    Workflow
    Application: Yeast Colonies
    Image processing Image segmentation Image labeling
    This tutorial workflow shows a segmentation workflow for labeling a yeast colony.
    knime > Examples > 99_Community > 01_Image_Processing > 03_Applications > 08_Yeast_Colonies
    0
    knime
  17. Go to item
    Workflow
    Group By
    Image processing Image segmentation Image aggregation
    This workflow shows the use of the GroupBy Node in the context of Image Processing where it can be used to merge individual segme…
    knime > Examples > 99_Community > 01_Image_Processing > 01_Tutorials > 01_Node_Tutorials > 07_Group_By
    0
    knime

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