Calculates a distribution of the mass error from given mass spectra and IDs. Web Documentation for IDMassAccuracy

Digests an RNA sequence database in-silico. Web Documentation for RNADigestor

Perform morphological operations (like erode and dilate or open and close) on images.

This node lists any foreign key columns for the selected database table This node was developed by Vernalis Research . For feedback and more information, please contact knime@vernalis.com

Can be used to calibrate RTs of peptide hits linearly to standards. Web Documentation for IDRTCalibration

A flow variable specifies the location of the file to be registered. The owner of the freshly registered data set is specified by a variable. For more details see openBIS KNIME Nodes .

Filters WKT (Well-known Text) geometries according to their characteristics or geometries using the Contextual Query Language Only the lines for which the expression is true will be kept. Examples of…

This node accepts a table with molecules and returns table with standardized molecules in accordance to applied options. In case of activation multiple options the order of applied modifications corr…

This node deletes the files and folders contained in the input table. The location may be a remote location. Folders will also be deleted if they still contain files.

This layer crops the layer input in three dimensions. Corresponds to the Keras Cropping 3D Layer .

This node is part of the legacy database framework. For more information on how to migrate to the new database framework see the migration section of the database documentation . This node allows col…

This node provides the possibility to append an arbitrary number of flow variables or modify existing variables using expressions. For each variable that shall be appended or modified a separate expr…

This node detects the dominant language of a text by utilizing the Amazon Comprehend service. Amazon Comprehend is a natural language processing (NLP) service that uses machine learning to discover i…

Read lines from a file or URL. Each line will be represented by a single string data cell in a single row. The row prefix and column header can be specified in the dialog.

Shapley Values originated in game theory and in the context of machine learning they have recently became a popular tool for the explanation of model predictions. The Shapley Value of a feature for a…

This node generates 1 plate's worth of plate and well IDs to a table. The user selects the plate size and fill direction. The node creates a table with the following columns: Plate Index - a numerica…

LIME stands for Local Interpretable Model-agnostic Explanations. It tries to explain individual predictions of a black box model by training a local surrogate model that is easier to understand (e.g.…

The Recursive Loop node pair enables the passing of two data tables from the Recursive Loop End's input ports 1 and 2 back to the Recursive Loop Start's output ports 0 and 1. The Loop Start requires …

Allows running an external program on the data. It will write out the incoming datatable into a temporary file as specified format which can be used as an input to an external tool. After the tool fi…

Structures and activities of molecules is best viewed in the context of chemical neighbourhood. In the network view, molecules are represented by nodes coloured according to chosen property. A pair o…