MicroRazerS uses a prefix-based mapping strategy to map small RNA reads possibly containing 3' adapter sequence. Input to MicroRazerS is a reference genome file and a file with single-end reads. Use -…

RazerS 3 is a versatile full-sensitive read mapper based on k-mer counting and seeding filters. It supports single and paired-end mapping, shared-memory parallelism, and optimally parametrizes the fil…

Read correction node for the GASiC approach. The node takes a normalized read count vector and a similarity matrix for the genomes and computes a corrected abundance vector for the given species.

Either simulate variation and write out the result to VCF and optionally FASTA files. Web Documentation for MasonVariator

Fuses multiple prediction confidences into one, combined prediction, using the selected fusion method. The selected fusion method will be applied to all confidence values (resulting from multiple pred…

Runs Gaussian jobs on Input files

This node maps data of a high dimensional space onto a lower (usually 2 or 3) dimensional space. Therefore the Sammons mapping is applied, which iteratively decreases the difference of the distances o…

samtools mpileup | bcftools -bvcg Web Documentation for SamtoolsMPileup

Read a SVL snippet from a file.

This is the end of a feature selection loop which selects features according to a feature selection strategy. It allows you to select a flow variable that contains a prediction score (usually from a p…