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Bioinformatics
Life Sciences 16S rRNA BLAST RESTful interfaces DNA DNA sequence comparison Genetic Variation Interactive views Practicing Data Science
  1. Workflow
    Gut Microbiome Analysis of IBD Patients (16S)
    Life sciences Bioinformatics Metagenomics
    +4
    This workflow investigates the composition of gut microbial communities from individuals with inflammatory bowl disease (IBD). Sa…
    knime > Life Sciences > Bioinformatics > Microbiome_Analysis
    2
    knime
  2. Workflow
    Reproducible Variant Prioritization
    Bioinformatics Life Sciences Genetic Variation
    Finding disease-causal variants among large amounts of present variants remains a major challenge in next-generation sequencing e…
    knime > Life Sciences > Bioinformatics > Variant_Prioritization
    1
    knime
  3. Workflow
    Gene Expression Analysis
    Life Sciences Bioinformatics R
    +2
    In this workflow, we analyze RNA-Seq data from tumors and matched normal tissue from three patients with oral squamous cell carci…
    knime > Examples > 08_Other_Analytics_Types > 02_Chemistry_and_Life_Sciences > 07_Gene_Expression_Analysis
    1
    knime
  4. Workflow
    Simple Example Variant Effect Predictor
    Life Sciences Bioinformatics
    This workflow illustrates a simple use of the Variant Effect Predictor verified component. The effect of genetic variants based o…
    jeany > Public > Verified Component Example Workflows > Simple Example Variant Effect Predictor
    0
    jeany
  5. Workflow
    Simple Example Genome Assembly Coordinates Converter
    Life Sciences Bioinformatics
    This workflow illustrates a simple use of the Genome Assembly Coordinates Converter verified component. You can also find an appl…
    jeany > Public > Verified Component Example Workflows > Simple Example Genome Assembly Coordinates Converter
    0
    jeany
  6. Workflow
    BLAST from the PAST
    Bioinformatics DNA sequence comparison Asynchronous REST operations
    +4
    This example shows how to run the BLAST RESTful interfaces to submit BLAST searches inside of KNIME Analytics Platform. BLAST (Ba…
    knime > Examples > 50_Applications > 48_BLAST_from_the_PAST > BLAST_from_the_PAST
    0
    knime
  7. Workflow
    Example Workflow for One-Hot Encoder (Biological Sequences) Component
    Bioinformatics Deep learning One-hot encoding
    +2
    In this example workflow we demonstrate the usage of One-Hot Encoder (Biological Sequences) component which is part of the KNIME …
    temesgen-dadi > Public > Example_Workflows_for_Components > DS-363_Example_WF_for_One-Hot_Encoder_Component
    0
    temesgen-dadi