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Biology
Apache Spark BigData JSON REST Spark Chemistry AWS BLAST RESTful interfaces Big Data Community Nodes
+2
  1. Workflow
    Disease Genes
    Biology Disease Genes
    +10
    This workflow highlights the functionality of KNIME for exploring, analyzing, and visualizing life science data related to diseas…
    knime > Examples > 03_Visualization > 02_JavaScript > 10_Disease_Genes
    1
    knime
  2. Workflow
    04_Generate_Features
    Apache Spark KNIME Workflow Executor for Apache Spark KWEfAS
    +4
    This is the forth workflow in the PubChem Big Data story.
    knime > Life Sciences > Cheminformatics > ChemistryFPs_vs_BiologyFPs > DataPrep > 04_Generate_Features
    0
    knime
  3. Workflow
    Fun with Tags
    Biology
    Automated access to disease information is an important goal of information extraction and text mining efforts. Here, we want to …
    b_eslami > Public > 02_Chemistry_and_Life_Sciences > 02_Fetch_And_Transform_PubChem_Data > 03_Fun_with_Tags
    0
    b_eslami
  4. Workflow
    Fetch and Transform PubChem Data
    BigData Spark JSON
    +2
    This workflow prepares a data set using Local Big Data Environment for Data Chefs Battle: Chemistry vs Biology. It collects resul…
    b_eslami > Public > 02_Chemistry_and_Life_Sciences > 02_Fetch_And_Transform_PubChem_Data > 02_Fetch_And_Transform_PubChem_Data
    0
    b_eslami
  5. Workflow
    02_Pivot_PubChemData
    Big Data AWS Apache Spark
    +4
    This is the second workflow in the PubChem Big Data story.
    knime > Life Sciences > Cheminformatics > ChemistryFPs_vs_BiologyFPs > DataPrep > 02_Pivot_PubChemData
    0
    knime
  6. Workflow
    Fetch and Transform PubChem Data
    BigData Spark JSON
    +2
    This workflow prepares a data set using Local Big Data Environment for Data Chefs Battle: Chemistry vs Biology. It collects resul…
    knime > Examples > 08_Other_Analytics_Types > 02_Chemistry_and_Life_Sciences > 02_Fetch_And_Transform_PubChem_Data > 02_Fetch_And_Transform_PubChem_Data
    0
    knime
  7. Workflow
    BLAST from the PAST
    Bioinformatics DNA sequence comparison Asynchronous REST operations
    +4
    This example shows how to run the BLAST RESTful interfaces to submit BLAST searches inside of KNIME Analytics Platform. BLAST (Ba…
    knime > Examples > 50_Applications > 48_BLAST_from_the_PAST > BLAST_from_the_PAST
    0
    knime
  8. Workflow
    Interactive visualization of epidemological data from zika virus
    Composite interactive view Visual analysis Epidemiological data
    +5
    This workflow illustrates how to interactively explore geolocation as well as phylogenetic data with KNIME AP. It is inspired by …
    knime > Examples > 03_Visualization > 04_Geolocation > 09_Geo_phylogenetic_analysis_Zika
    0
    knime
  9. Node / Manipulator
    Speedy Sequence Alignment Visualisation
    Community Nodes Vernalis Biology
    +2
    The node generates an SVG rendering of pairs of aligned sequences. This node was developed by Vernalis Research . For feedback an…
    0
    vernalis
  10. Node / Manipulator
    Speedy Sequence Analysis
    Community Nodes Vernalis Biology
    +2
    The node performs count and / or %age analysis of sequence residue types This node was developed by Vernalis Research . For feedb…
    0
    vernalis
  11. Node / Manipulator
    Speedy Sequence to SMILES
    Community Nodes Vernalis Biology
    +2
    The node generates SMILES representations of sequences according to the preferences set by the user This node was developed by Ve…
    0
    vernalis