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Genes
Life sciences REST Gene names Ontologies RDF SPARQL UniProt GraphQL
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    Workflow
    Tagging Genes in Disease Related Publications
    Life Sciences Ontologies RDF
    +4
    This example workflow shows how ontology terms can be used to tag biomedical literature. In the first step, the Triple File Reade…
    knime > Life Sciences > Text_Processing > Document_Tagging_Using_Ontology_Terms
    2
    knime
  2. Go to item
    Workflow
    GET Request Example (Life Sciences)
    REST Genes Life Sciences
    In this workflow snippet, we will use the REST service provided by MyGene.info [1,2] (https://mygene.info/) to obtain a list of h…
    knime > Workflow Snippets > GET Request
    2
    knime
  3. Go to item
    Workflow
    Tagging Genes in Disease Related Publications
    Life Sciences Ontologies RDF
    +4
    This example workflow shows how ontology terms can be used to tag biomedical literature. In the first step, the Triple File Reade…
    knime > Digital Healthcare > Tag Genes in Disease related Literature
    1
    knime
  4. Go to item
    Workflow
    Disease Genes
    Biology Disease Genes
    +10
    This workflow highlights the functionality of KNIME for exploring, analyzing, and visualizing life science data related to diseas…
    knime > Examples > 03_Visualization > 02_JavaScript > 10_Disease_Genes
    1
    knime
  5. Go to item
    Workflow
    Challenge 12: Obtaining a List of Human Genes via REST
    REST Genes Life Sciences
    +2
    You have been working for a Life Sciences company for a month as a a data wrangler. Several coworkers from the Biology department…
    knime > Just KNIME It! > Challenge 12 - Obtaining a List of Human Genes via REST - Solution
    0
    knime
  6. Go to item
    Workflow
    GET Request Example (Life Sciences)
    REST Genes Life Sciences
    In this workflow snippet, we will use the REST service provided by MyGene.info [1,2] (https://mygene.info/) to obtain a list of h…
    alice_krebs > Public > 2023_01_ETH_Workshop > 02_WebServices_DataRetrieval
    0
    alice_krebs
  7. Go to item
    Workflow
    Query GraphQL API
    Life Sciences GraphQL Genes
    +1
    This workflow snippet demonstrate an example query to a GraphQL API. The Opentargets Platform provides a GraphQL API, which suppo…
    knime > Workflow Snippets > Query GraphQL API
    0
    knime

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