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Canonical SMILES

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This node takes a table containing a column with molecules or reactions as a target and append new column with these objects in canonical SMILES format (string representation).

Supported types:

  • Molecule: String, SDF, Smiles, CML, Mol, InChI
  • Reaction: String, RXN, Smiles, CML

The node is based on the Indigo cheminformatics toolkit.

Node details

Input ports
  1. Type: Table
    Input data
    Table containing molecules or reactions.
Output ports
  1. Type: Table
    Output data
    The same as input, but with a new string column containing canonical SMILES representations.

Extension

The Canonical SMILES node is part of this extension:

  1. Go to item

Related workflows & nodes

  1. Go to item
  2. Go to item
  3. Go to item

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