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ExpressionSet Loader

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Feb 9, 2022 7:20 PM
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This component will use a "file_location" of an ExpressionSet (variable) as input: 1) ExpressionSet Chooser Generates 3 different tables: 1) phenoData 2) featureData 3) assayData In the configuration you can choose the type of assayData (ex. "exprs", ...)

Component details

Input ports
  1. Type: Flow Variable
    file_location Variable
    The location path of the ExpressionSet
Output ports
  1. Type: Table
    phenoData Table
    Knime Table with the phenoData of the ExpressionSet
  2. Type: Table
    featureData Table
    Knime Table with the featureData of the ExpressionSet
  3. Type: Table
    assayData Table
    Knime Table with the AssayData of the ExpressionSet. Type of assayData is based on the type chosen in the configuration

Used extensions & nodes

Created with KNIME Analytics Platform version 4.5.1
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    KNIME Python Integration

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    KNIME Quick FormsTrusted extension

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This component does not have nodes, extensions, nested components and related workflows

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By using or downloading the component, you agree to our terms and conditions.

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