Abner tagger (deprecated)

Manipulator

This node recognizes biomedical named entities, such as genes, proteins or cells and assigns tags to the corresponding terms like "PROTEIN", "RNA", "DNA", "CELL LINE" or "CELL TYPE". Furthermore it can be specified that found named entities are marked as unmodifiable, meaning that they are not going to be modified by any node afterwards. As underlying named entity recognition software ABNER (A Biomedical named entity recognizer) was used. For more details see: http://pages.cs.wisc.edu/~bsettles/abner/.

Input Ports

  1. Type: Data
    The input table containing the documents to tag.

Output Ports

  1. Type: Data
    An output table containing the tagged documents.

Extension

This node is part of the extension

KNIME Textprocessing

v4.0.0

Short Link

Drag node into KNIME Analytics Platform