Abner Filter (deprecated)


Filters all terms contained in the given bag of words (input table) with biomedical named entities (BNER) tags assigned, not specified in the dialog. The terms are filtered out of the bag of words and the documents as well if deep preprocessing is checked.
To detect biomedical named entities, the ABNER (A Biomedical Named Entity Recognizer) Software is used (see http://pages.cs.wisc.edu/~bsettles/abner/ for details).
A term is kept if at least one of its assigned BNER tags is a valid tag. If strict filtering is set, all assigned BNER tags of a term have to be valid.

Input Ports

  1. Type: Data The input table which contains the terms to filter.

Output Ports

  1. Type: Data The output table which contains the filtered terms.

Find here

Other Data Types > Text Processing > Preprocessing

Make sure to have this extension installed: