EICExtractor

Extracts intensities from dedicates positions in a LC/MS map

Web Documentation for EICExtractor

Input ports

1. Type: URI Object
   in [mzML]
   Input raw data file [mzML]
2. Type: URI Object
   in_header [txt]
   [for Waters data only] Read additional information from _HEADER.TXT. Provide one for each raw input file. [txt,opt.]
3. Type: URI Object
   pos [edta]
   Input config file stating where to find signal [edta]

Output ports

1. Type: URI Object
   out [csv]
   Output quantitation file (multiple columns for each input compound) [csv]
2. Type: URI Object
   out_debug_TIC [mzML]
   Optional output file (for first input) containing the smoothed TIC, S/N levels and picked RT positions [mzML]