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PeptideIndexer

Community NodesOpenMSIdentification Processing
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Refreshes the protein references for all peptide hits.

Web Documentation for PeptideIndexer

Node details

Input ports
  1. Type: URI Object
    in [idXML]
    Input idXML file containing the identifications. [idXML]
  2. Type: URI Object
    fasta [fasta]
    Input sequence database in FASTA format. Leave empty for using the same DB as used for the input idXML (this might fail). Non-existing relative filenames are looked up via 'OpenMS.ini:id_db_dir' [fasta,opt.]
Output ports
  1. Type: URI Object
    out [idXML]
    Output idXML file. [idXML]

Extension

The PeptideIndexer node is part of this extension:

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Related workflows & nodes

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  3. Go to item

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