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  • Convert Human Genome Assembly
ComponentComponent

Convert Human Genome Assembly

Last update: 

This component converts the coordinates between different assembly versions of the human genome. This is done using an endpoint from Ensembl's REST API (http://rest.ensembl.org/documentation/info/assembly_map).

Component details

Input ports
  1. Data Type: Data
    Input table with the coordinates to be mapped from one assembly to another.
Output ports
  1. Data Type: Data
    Output table with the mapped coordinates.

Used extensions & nodes

Created with KNIME Analytics Platform version 4.2.1
  • KNIME Base nodes Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.2

  • KNIME Expressions Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.1

  • KNIME Quick Forms Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.1

  • KNIME REST Client Extension Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.0

  • KNIME XML-Processing Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.1

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