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OpenSwath

OpenMSMass spectrometryOpenSWATHSWATHDIA
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Dec 5, 2018 1:26 PM
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Directly uses the OpenSWATHWorkflow node with inputs and outputs. Requires an existing Assay Library as input. Example input data: To download the data from the archive, check the box on the folder and click on the download button (arrow) on the top left. Download and unpack the "OpenSWATH" data into a directory "Example_data/OpenSWATH" next to this workflow inside your KNIME workspace.

External resources

  • Example Data
  • Home of the OpenMS plugin
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Used extensions & nodes

Created with KNIME Analytics Platform version 4.7.1
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    Generic Workflow Nodes for KNIMETrusted extension

    Freie Universitaet Berlin, Universitaet Tuebingen, and the GenericWorkflowNodes Team

    Version 1.0.0

    gkn-team
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    OpenMSTrusted extension

    Version 2.7.0

    openms-team profile image
    openms-team

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