Simple workflow for peptide identification and quantification.
No smart protein inference is done and all possible proteins are reported for each peptide.
Quantification is based on normalized feature intensities of peptides.
Example input data:
To download the data from the archive, check the box on the folder and click on the download button (arrow) on the top left.
Download and unpack the "iPRG2015" data into a directory "Example_data/iPRG2015" next to this workflow inside your KNIME workspace.
Workflow
openmsLFQ_iPRG2015
External resources
Used extensions & nodes
Created with KNIME Analytics Platform version 4.7.1
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Generic Workflow Nodes for KNIME
Freie Universitaet Berlin, Universitaet Tuebingen, and the GenericWorkflowNodes Team
Version 1.0.0
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Legal
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