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openmsLFQ_iPRG2015

OpenMSMass spectrometryPeptide identificationPeptide quantification
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Aug 25, 2014 5:33 PM
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Simple workflow for peptide identification and quantification. No smart protein inference is done and all possible proteins are reported for each peptide. Quantification is based on normalized feature intensities of peptides. Example input data: To download the data from the archive, check the box on the folder and click on the download button (arrow) on the top left. Download and unpack the "iPRG2015" data into a directory "Example_data/iPRG2015" next to this workflow inside your KNIME workspace.

External resources

  • Example Data
  • Home of the OpenMS plugin
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Used extensions & nodes

Created with KNIME Analytics Platform version 4.7.1
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    Generic Workflow Nodes for KNIMETrusted extension

    Freie Universitaet Berlin, Universitaet Tuebingen, and the GenericWorkflowNodes Team

    Version 1.0.0

    gkn-team
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    OpenMSTrusted extension

    Version 2.7.0

    openms-team profile image
    openms-team

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