Uses Decoy generation from DDA data, targeted DIA analysis using OpenSWATH and pyprophet for statistical validation.
Example input data:
To download the data from the archive, check the box on the folder and click on the download button (arrow) on the top left.
Download and unpack the "DIAMetAlyzer" data into a directory "Example_data/DIAMetAlyzer" next to this workflow inside your KNIME workspace.
Workflow
DIAMetAlyzer_2.0
External resources
Used extensions & nodes
Created with KNIME Analytics Platform version 4.7.1 Note: Not all extensions may be displayed.
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Generic Workflow Nodes for KNIME
Freie Universitaet Berlin, Universitaet Tuebingen, and the GenericWorkflowNodes Team
Version 1.0.0
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Legal
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