- Type: URI Objectargument-0 [sam][sam]
- Type: URI Objectargument-1 [gff,gtf][gff,gtf]
Node / Manipulator
Insegt
Node details
Input ports
Output ports
- Type: URI Objectread-output [gff]Output filename for read-output, which contains the mapped annotations followed by their parent annotation. [gff]
- Type: URI Objectanno-output [gff]Output filename for anno-output, which contains the annotations similar to the GFF input and additionally the counts of the mapped reads and the normalized expression levels in RPKM. [gff]
- Type: URI Objecttuple-output [gff]Output filename for tuple-output, which contains exon tuples connected by reads or matepairs. [gff]
Extension
The Insegt node is part of this extension:
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Related workflows & nodes
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