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Substructure search dashboard

Life ScienceCheminformaticsWebportal
alice_krebs profile image
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Nov 10, 2023 9:57 AM
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This workflow demonstrates how to do substructure search on a molecule database in the KNIME webportal. The first step is the login to the database, and the substructure for which we are looking can be either entered as SMILES or be drawn or modified in the interactive sketcher. The resulting molecules containing the desored substructure are depicted as atile view.

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Used extensions & nodes

Created with KNIME Analytics Platform version 4.7.7
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    KNIME Base Chemistry Types & NodesTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.1

    knime
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    KNIME Base nodesTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.7

    knime
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    KNIME DatabaseTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.4

    knime
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    KNIME Excel SupportTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.0

    knime
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    KNIME JavaScript ViewsTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.0

    knime
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    KNIME Quick FormsTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.4

    knime
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    KNIME SVG SupportTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.0

    knime
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    RDKit Nodes FeatureTrusted extension

    NIBR

    Version 4.7.0

    manuelschwarze

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