Fetch and Transform PubChem Data

Workflow

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This workflow prepares a data set using Local Big Data Environment for Data Chefs Battle: Chemistry vs Biology. It collects results of biological experiments from PubChem database API and cleans them up

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Fetch and Transform PubChem Data

KNIME Core

KNIME Expressions

KNIME Extension for Apache Spark

KNIME Extension for Big Data File Formats

KNIME Extension for Local Big Data Environments

KNIME File Handling Nodes

KNIME JSON-Processing

KNIME REST Client Extension

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Fetch and Transform PubChem Data

Used extensions & nodes

KNIME CoreTrusted extension

KNIME ExpressionsTrusted extension

KNIME Extension for Apache SparkTrusted extension

KNIME Extension for Big Data File FormatsTrusted extension

KNIME Extension for Local Big Data EnvironmentsTrusted extension

KNIME File Handling NodesTrusted extension

KNIME JSON-ProcessingTrusted extension

KNIME REST Client ExtensionTrusted extension

Legal

KNIME Core

KNIME Expressions

KNIME Extension for Apache Spark

KNIME Extension for Big Data File Formats

KNIME Extension for Local Big Data Environments

KNIME File Handling Nodes

KNIME JSON-Processing

KNIME REST Client Extension