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Fetch and Transform PubChem Data

BigData Spark JSON REST Biology
BE

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This workflow prepares a data set using Local Big Data Environment for Data Chefs Battle: Chemistry vs Biology. It collects results of biological experiments from PubChem database API and cleans them up

Used extensions & nodes

Created with KNIME Analytics Platform version 3.6.0
  • KNIME Core Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 3.6.0

    knime
  • KNIME Expressions Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 3.6.0

    knime
  • KNIME Extension for Apache Spark Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 2.3.0

    knime
  • KNIME Extension for Big Data File Formats Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 3.6.0

    knime
  • KNIME Extension for Local Big Data Environments Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 2.3.0

    knime
  • KNIME File Handling Nodes Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 3.6.0

    knime
  • KNIME JSON-Processing Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 3.6.0

    knime
  • KNIME REST Client Extension Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 3.6.0

    knime
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