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Substructure Matcher

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This node accepts a table with structures (supports reactions and molecules) and a table with query structures, and divides the first table into three sets: one with all rows that contain the specified query structures as a substructure, the other with all structures that do not contain it, the last one gathers all the rows with invalid data.

Supported types:

  • Molecule: String, SDF, Smiles, CML, Mol, InChI
  • Reaction: String, RXN, SMILES

The node is based on the Indigo cheminformatics toolkit.

Node details

Input ports
  1. Type: Table
    Input data
    Table containing molecules or reactions.
  2. Type: Table
    Input data
    Table containing the query structure.
Output ports
  1. Type: Table
    Matched
    Rows with matched structures.
  2. Type: Table
    Unmatched
    Rows with unmatched structures.

Extension

The Substructure Matcher node is part of this extension:

  1. Go to item

Related workflows & nodes

  1. Go to item
  2. Go to item
  3. Go to item

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