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Instantaneous Diffusion Coefficient

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Jun 9, 2020 7:28 AM
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Compute the instantaneous diffusion coefficient (IDC) for each trajectory in the input table. A trajectory is defined by a group of rows (defined by the grouping columns) containing particle coordinates and time information. The IDC is calculated as 1/4 of the mean of the squared displacements at the minimum time scale, divided by the time difference.

Component details

Input ports
  1. Type: Table
    Trajectory input table
    Table containing time and coordinates of detections grouped into tracks.
Output ports
  1. Type: Table
    Instantaneous Diffusion Coefficients
    Calculated value of the instantaneous diffusion coefficient per track.

Used extensions & nodes

Created with KNIME Analytics Platform version 4.1.3
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    KNIME CoreTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.3

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    KNIME Math Expression (JEP)Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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    KNIME Quick FormsTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.3

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