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PIA Compiler

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To start a new analysis, you need to compile the search results of one or more search engine runs. The data is structured to speed up further analyses. The result is saved as an XML file, which is used as input for the PIA analysis nodes.

Node details

Input ports
  1. Type: Table
    Input file(s)
    The spectrum identification results files, which should be compiled for this analysis. Either the path to the files or the local URLs are required.
Output ports
  1. Type: Table
    PIA XML file
    The PIA intermediate XML file containing the compilation of search results. To save space the file will be stored as GZipped binary file. It can be saved to any Location using the "Binary Objects to Files" node.

Extension

The PIA Compiler node is part of this extension:

Related workflows & nodes

  1. 01-PIA_first_analysis
    julianu > PIA > 01-PIA_first_analysis
    julianu
  2. 01t-PIA_with_multiple_search_engines
    julianu > PIA > 01t-PIA_with_multiple_search_engines
    julianu
  3. PIA_PRIDE_reanalysis
    julianu > PIA > PIA_PRIDE_reanalysis
    julianu
  4. 00-test_workflow
    julianu > PIA > 00-test_workflow
    julianu
  5. 02-PIA_and_quant
    julianu > PIA > 02-PIA_and_quant
    julianu
  6. 02-download_and_analyze_raw_file
    julianu > MaCProQC > 02-download_and_analyze_raw_file
    julianu