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Convert Human Genome Assembly

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Versionv1.0Latest, created on 
Oct 20, 2023 1:29 PM
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This component converts the coordinates between different assembly versions of the human genome. This is done using an endpoint from Ensembl's REST API (http://rest.ensembl.org/documentation/info/assembly_map).

Component details

Input ports
  1. Type: Table
    Input table with the coordinates to be mapped from one assembly to another.
Output ports
  1. Type: Table
    Output table with the mapped coordinates.

Used extensions & nodes

Created with KNIME Analytics Platform version 4.2.1
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    KNIME Base nodesTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.2

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    KNIME ExpressionsTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.1

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    KNIME Quick FormsTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.1

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    KNIME REST Client ExtensionTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.0

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    KNIME XML-ProcessingTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.2.1

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This component does not have nodes, extensions, nested components and related workflows

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