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NodeNode / Manipulator

ConsensusTextReader

Community Nodes OpenMS Conversion
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This node can be used to read the output of the TextExporter tool into a KNIME table. The TextExporter, when applied to a consensusXML file, writes out information on the contained consensus elements. Namely the consensus location (mz and rt) and the location, quality, intensity, and charge of all the individual sub-elements. All these information will be parsed into a KNIME table.

Node details

Input ports
  1. Type: URI Object
    Consensus File
    Incoming text file created with the TextExporter node.
Output ports
  1. Type: Table
    Consensus Table
    Table containing the information on the consensus elements.

Extension

The ConsensusTextReader node is part of this extension:

Related workflows & nodes