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NodeNode / Manipulator

OpenPepXLLF

Community Nodes OpenMS Identification
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Node details

Input ports
  1. Type: URI Object
    in [mzML]
    Input file containing the spectra. [mzML]
  2. Type: URI Object
    database [fasta]
    Input file containing the protein database. [fasta]
  3. Type: URI Object
    decoy_database [fasta]
    Input file containing the decoy protein database. Decoys can also be included in the normal database file instead (or additionally). [fasta,opt.]
Output ports
  1. Type: URI Object
    out_idXML [idXML]
    Results in idXML format (at least one of these output parameters should be set, otherwise you will not have any results). [idXML]
  2. Type: URI Object
    out_mzIdentML [mzid]
    Results in mzIdentML (.mzid) format (at least one of these output parameters should be set, otherwise you will not have any results) [mzid]
  3. Type: URI Object
    out_xquestxml [xquest.xml]
    Results in the xquest.xml format (at least one of these output parameters should be set, otherwise you will not have any results). [xquest.xml]
  4. Type: URI Object
    out_xquest_specxml [spec.xml]
    Matched spectra in the xQuest .spec.xml format for spectra visualization in the xQuest results manager. [spec.xml]

Extension

The OpenPepXLLF node is part of this extension: