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NodeNode / Manipulator

OpenSwathAssayGenerator

Community Nodes OpenMS Targeted Experiments
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Node details

Input ports
  1. Type: URI Object
    in [tsv,mrm,pqp,TraML]
    Input file [tsv,mrm,pqp,TraML]
  2. Type: URI Object
    swath_windows_file [txt]
    Tab separated file containing the SWATH windows for exclusion of fragment ions falling into the precursor isolation window: lower_offset upper_offset \newline 400 425 \newline ... Note that the first line is a header and will be skipped. [txt,opt.]
  3. Type: URI Object
    unimod_file [xml]
    (Modified) Unimod XML file (http://www.unimod.org/xml/unimod.xml) describing residue modifiability [xml,opt.]
Output ports
  1. Type: URI Object
    out [tsv,pqp,TraML]
    Output file [tsv,pqp,TraML]

Extension

The OpenSwathAssayGenerator node is part of this extension: