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SemanticValidator

Community NodesOpenMS[for Developers]
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SemanticValidator for semantically validating certain XML files.

Web Documentation for SemanticValidator

Node details

Input ports
  1. Type: URI Object
    in [analysisXML,mzML,traML,mzid,mzData,xml]
    Input file (any xml file) [analysisXML,mzML,traML,mzid,mzData,xml]
  2. Type: URI Object
    mapping_file [xml]
    Mapping file which is used to semantically validate the given XML file against this mapping file (see 'share/OpenMS/MAPPING' for templates). [xml]
  3. Type: URI Object
    cv [obo]
    Controlled Vocabulary files containg the CV terms (if left empty, a set of default files are used) [obo,opt.]

Extension

The SemanticValidator node is part of this extension:

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Related workflows & nodes

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