RawFileConverter

Converts between different MS file formats.

Web Documentation for RawFileConverter

Input ports

1. Type: URI Object
   in [mzML,mzXML,mgf,raw,cachedMzML,mzData,dta,dta2d,featureXML,consensusXML,ms2,fid,tsv,peplist,kroenik,edta,oms]
   Input file to convert. [mzML,mzXML,mgf,raw,cachedMzML,mzData,dta,dta2d,featureXML,consensusXML,ms2,fid,tsv,peplist,kroenik,edta,oms]
2. Type: URI Object
   NET_executable []
   The .NET framework executable. Only required on linux and mac. [,opt.]
3. Type: URI Object
   ThermoRaw_executable [exe]
   The ThermoRawFileParser executable. [exe,opt.]

Output ports

1. Type: URI Object
   out [mzML,mzXML,cachedMzML,mgf,featureXML,consensusXML,edta,mzData,dta2d,csv,sqmass,oms]
   Output file [mzML,mzXML,cachedMzML,mgf,featureXML,consensusXML,edta,mzData,dta2d,csv,sqmass,oms]