Uses Decoy generation from DDA data, targeted DIA analysis using OpenSWATH and pyprophet for statistical validation.
Example input data:
To download the data from the archive linked below, check the box on the folder and click on the download button (arrow) on the top left.
Download and unpack the "DIAMetAlyzer" data into a directory "Example_data/DIAMetAlyzer" inside your KNIME workspace.
Workflow
DIAMetAlyzer_2.0
External resources
Used extensions & nodes
Created with KNIME Analytics Platform version 4.7.3 Note: Not all extensions may be displayed.
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Generic Workflow Nodes for KNIME
Freie Universitaet Berlin, Universitaet Tuebingen, and the GenericWorkflowNodes Team
Version 1.1.0
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Legal
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