Hub
Pricing About
WorkflowWorkflow

Query GraphQL API

Life SciencesGraphQLGenesOpen Targets Platform
knime profile image
Draft Latest edits on 
Oct 15, 2021 12:27 PM
Drag & drop
Like
Download workflow
Workflow preview
This workflow snippet demonstrate an example query to a GraphQL API. The Opentargets Platform provides a GraphQL API, which supports queries for a single target, disease/phenotype, drug, or target-disease association. In this example we provide the Ensembl Gene ID to get further informations like approved symbol, approved name, description, genomic location (chromosome, start- and endpoints), alternative genes, unique diseases and unique drugs. The Ensembl IDs are provided in a table and the query is define in the String Manipulation node. The query is transformed to a JSON format, so it can be send as a request body in the POST request node. The response JSON is parsed using the JSON Path node and a simple Column Filter node removes the JSON query column for a cleaner table. For more informations about the Opentarget Platform GraphQL API see the documentation: https://platform-docs.opentargets.org/data-access/graphql-api To get an understanding of the Opentarget Platform GraphQL API and test different queries, please use the Opentarget Platform GraphQL Playground: https://api.platform.opentargets.org/api/v4/graphql/browser

External resources

  • Open Targets Platform GraphQL Playground
  • Open Targets Platform GraphQL API Documentation
  • Open Targets Platform
Loading deploymentsLoading ad hoc jobs

Used extensions & nodes

Created with KNIME Analytics Platform version 4.4.1
  • Go to item
    KNIME Base nodesTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.4.1

    knime profile image
    knime
  • Go to item
    KNIME JavasnippetTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.4.1

    knime profile image
    knime
  • Go to item
    KNIME JSON-ProcessingTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.4.1

    knime profile image
    knime
  • Go to item
    KNIME REST Client ExtensionTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.4.0

    knime profile image
    knime

Legal

By using or downloading the workflow, you agree to our terms and conditions.

KNIME
Open for Innovation

KNIME AG
Talacker 50
8001 Zurich, Switzerland
  • Software
  • Getting started
  • Documentation
  • Courses + Certification
  • Solutions
  • KNIME Hub
  • KNIME Forum
  • Blog
  • Events
  • Partner
  • Developers
  • KNIME Home
  • Careers
  • Contact us
Download KNIME Analytics Platform Read more about KNIME Business Hub
© 2025 KNIME AG. All rights reserved.
  • Trademarks
  • Imprint
  • Privacy
  • Terms & Conditions
  • Data Processing Agreement
  • Credits