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Partial Dependence Plot Example

Partial dependencePdpPdp plotIceIce curves
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keith_mccormick profile image
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Jun 25, 2019 2:15 PM
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This is an example for visualizing a partial dependence plot and an ICE curves plot in KNIME. An XGBoost model was picked, but any model and its set of Learner and Predictor nodes can be used. - Read the dataset about wines - Partition the data in train and test - Create the samples via the apposite shared component Partial Dependence Pre-processing - Score the samples using the predictor node and a trained model - Visualize the Partial Dependence/ICE Plot and customize it directly in the View (Execute > Right Click > Open View) - Apply and Close to save the custom in-view settings

External resources

  • Christoph Molnar - Interpretable Machine Learning - A Guide for Making Black Box Models Explainable - 5.1 Partial Dependence Plot (PDP)
  • Data Source: UCI - Wine Quality Data Set
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Used extensions & nodes

Created with KNIME Analytics Platform version 4.1.1
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    KNIME CoreTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.1

    knime_admin
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    KNIME Data GenerationTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

    knime_admin
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    KNIME Machine Learning Interpretability ExtensionTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

    knime_admin
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    KNIME Math Expression (JEP)Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

    knime_admin
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    KNIME Quick FormsTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.1

    knime_admin
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    KNIME XGBoost IntegrationTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

    knime_admin

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