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External API Demo

HTTPPython
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Feb 15, 2024 5:12 PM
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This small example workflow demonstrates how to submit GET requests to an external API using KNIME. A table of target UNIPROT ids is read from a file. The DrugCentral API is then used to fetch details about these targets. As well, similar information can be fetched from the PostgreSQL database. The GET Request node and the Python Script node both carry out the same functionality. The Python Script is node is provided to demonstrate that Python can be used within KNIME to communicate with external resources.

External resources

  • DrugCentral API
  • UNIPROT
  • DrugCentral
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Used extensions & nodes

Created with KNIME Analytics Platform version 5.2.1
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    KNIME Base nodesTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 5.2.1

    knime
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    KNIME DatabaseTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 5.2.0

    knime
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    KNIME JavasnippetTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 5.2.0

    knime
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    KNIME JSON-ProcessingTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 5.2.0

    knime
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    KNIME Python IntegrationTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 5.2.1

    knime
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    KNIME REST Client ExtensionTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 5.2.1

    knime

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