Peptide identification from mass-spectra

Identify peptides by matching mass-spectra to a candidate protein database. It supports a combination of multiple search engines and allows for the creation of a decoy database, re-scoring and confidence estimation (i.e. a false discovery rate).
It includes examples for how to potentially visualize and export the results.

External resources

• KNIME blog post
• Sample input database (with decoys included!)
• Sample input spectra
• Home of the OpenMS plugin