Desmond System Builder

The System Builder panel allows you to set up a biological system consisting of proteins, ligands, explicit solvent, membrane, and counter ions, so that you can perform simulations on the system with Desmond.

Backend implementation

$SCHRODINGER/utilities/multisim

Input ports

1. Type: Table
   Structure in Maestro format
   Input structure in Maestro format

Output ports

1. Type: Table
   CMS files
   CMS file