Glide Ligand Docking

Glide ligand docking jobs require a set of previously calculated receptor grids and one or more ligand structures. Preparation of the ligands before docking is strongly recommended. LigPrep or MacroModel can be used to prepare ligands. If a correct Lewis structure cannot be generated for a ligand, it will be skipped by the docking job.

Backend implementation

$SCHRODINGER/glide

Input ports

1. Type: Table
   Glide Grid
   Glide Grid
2. Type: Table
   Ligands in Maestro, Sd or Mol2 format
   Ligands in Maestro, Sd or Mol2 format

Output ports

1. Type: Table
   Pose Viewer/Ligands in Maestro or Sd format
   Pose Viewer in Maestro or Sd format (i.e Receptor and docked ligands or only ligands)