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BLAST

SchrödingerProtein Preparation and Refinement
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Search a protein sequence database using BLAST
Note: To enable web-based searching, please ensure the option "Allow use of web server for BLAST searches" found in the Jobs panel of Maestro preferences, has been checked.

Backend implementation

scripts/blastCLI.py run by cmdRunner.py
The script blastCLI.py is passed to cmdRunner.py to implement this node.

Node details

Input ports
  1. Type: Table
    Sequences in Maestro format
    Sequences in Maestro format
Output ports
  1. Type: Table
    Alignments in Maestro format
    BLAST alignments in Maestro format

Extension

The BLAST node is part of this extension:

  1. Go to item

Related workflows & nodes

  1. Go to item
  2. Go to item
  3. Go to item

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