Use the Multiple Sequence Viewer to edit an alignment and a corresponding homology model is built. A Glide grid is generated and the binding site is analyzed. A raytrace image of the model is also created.
[Requires: Prime, Glide, SiteMap, PyMOL] [Keywords: binding site, homology modeling, grid generation]
Workflow
Protein model building on an edited alignment
Used extensions & nodes
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KNIME AG, Zurich, Switzerland
Version 4.7.0
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Schrödinger
Versions 20.4.119, 20.4.68, 23.2.64
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