FxBamCoverage

Manipulator

Compute read coverage and C+G content for a genome.

Web Documentation for FxBamCoverage

Input Ports

  1. Type: URI Object
    Path to the reference file. [fasta,fa]
  2. Type: URI Object
    Path to the mapping file to analyze. [sam,bam]

Output Ports

  1. Type: URI Object
    Path to the resulting file. If omitted, result is printed to stdout. [coverage.tsv]

Extension

This node is part of the extension

SeqAn

v2.4.0

Short Link

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