GASiC

Read correction node for the GASiC approach. The node takes a normalized read count vector and a similarity matrix for the genomes and computes a corrected abundance vector for the given species.

Input ports

1. Type: Table
   Read mapping information
   Table containing for each read the information to which genomes it maps.
2. Type: Table
   Simulated mapping information
   Table containing for simulated reads from which genome they were simulated and to which genomes they map.

Output ports

1. Type: Table
   Corrected Abbundacen values
   Corrected abundance values.