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Fetch and Transform PubChem Data

BigDataSparkJSONRESTBiology
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Jun 20, 2018 10:19 AM
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This workflow prepares a data set using Local Big Data Environment for Data Chefs Battle: Chemistry vs Biology. It collects results of biological experiments from PubChem database API and cleans them up. In the top part the results of biological experiments are collected from PubChem database using its API. In the middle part the preprocessing of the data is performed using Local Big Data Environment. In the bottom part the data are backed up
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Created with KNIME Analytics Platform version 4.1.0
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    KNIME CoreTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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    KNIME ExpressionsTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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    KNIME Extension for Apache SparkTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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    KNIME Extension for Big Data File FormatsTrusted extension

    KNIME AG, Zurich, Switzerland

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    KNIME Extension for Local Big Data EnvironmentsTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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    KNIME File Handling NodesTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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    KNIME JSON-ProcessingTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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    KNIME Math Expression (JEP)Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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    KNIME REST Client ExtensionTrusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.1.0

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