DrugBank Network Analysis

The workflow analyses data from DrugBank (http://www.drugbank.ca/) a public available db that combines detailed drug (i.e. chemical, pharmacological and pharmaceutical) data with comprehensive drug target (i.e. sequence, structure, and pathway) information. Each drug is described by a drug card with more than 150 data fields of which only some are used in this workflow for demonstration. All necessary files are available at www.drugbank.ca/downloads The workflow requieres at least 2GB of main memory during execution (for details see the Requirements annotation)

External resources

Network Mining

Used extensions & nodes

Extensions Nodes

Created with KNIME Analytics Platform version 3.7.1

KNIME Base Chemistry Types & Nodes

KNIME AG, Zurich, Switzerland

Version 3.7.0
KNIME Chemistry Add-Ons

KNIME AG, Zurich, Switzerland

Version 3.7.0
KNIME Core

KNIME AG, Zurich, Switzerland

Version 3.7.1
KNIME Data Generation

KNIME AG, Zurich, Switzerland

Version 3.7.0
KNIME Itemset Mining

KNIME AG, Zurich, Switzerland

Version 3.7.0
KNIME Math Expression (JEP)

KNIME AG, Zurich, Switzerland

Version 3.7.0
KNIME Network Mining

KNIME AG, Zurich, Switzerland

Version 3.7.0
KNIME Quick Forms (legacy)

KNIME AG, Zurich, Switzerland

Version 3.7.0
KNIME Textprocessing

KNIME AG, Zurich, Switzerland

Version 3.7.1
KNIME XML-Processing

KNIME AG, Zurich, Switzerland

Version 3.7.0
Palladian for KNIME

This is an unpublished or unknown extension.

palladian.ws; Philipp Katz, Klemens Muthmann, David Urbansky.

Version 1.7.0

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License (CC-BY-4.0)