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BLAST from the PAST

Bioinformatics DNA sequence comparison Asynchronous REST operations BLAST RESTful interfaces Biology
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This example shows how to run the BLAST RESTful interfaces to submit BLAST searches inside of KNIME Analytics Platform. BLAST (Basic Local Alignment Search Tool) is a fast and robust algorithm that finds regions of similarity between biological sequences. In this example we use BLAST inside KNIME Analytics Platform to compare DNA extracted from a bone with a database of DNA sequences and find out which organism the bone belongs to.

Used extensions & nodes

Created with KNIME Analytics Platform version 4.5.0
  • KNIME Base nodes Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.5.0

  • KNIME Data Generation Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.5.0

  • KNIME JavaScript Views Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.5.0

  • KNIME Javasnippet Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.5.0

  • KNIME Math Expression (JEP) Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.5.0

  • KNIME Quick Forms Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.5.0

  • KNIME REST Client Extension Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.5.0

  • KNIME XML-Processing Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.5.0

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