This workflow performs a simple untargeted identification and quantification of metabolites from liquid chromatography mass spectrometry experiments (in mzML format).
It uses an accurate mass search based on feature data to lookup compounds in a database. Exports and visualizations of quant. results are also shown.
Input data is automatically downloaded via http from a public respository.
Workflow
Untargeted Metabolomics through accurate mass search in MS data
External resources
Used extensions & nodes
Created with KNIME Analytics Platform version 4.4.1
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Generic Workflow Nodes for KNIME
Freie Universitaet Berlin, Universitaet Tuebingen, and the GenericWorkflowNodes Team
Version 1.0.0
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Legal
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