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Metabolite_ID

OpenMS Mass spectrometry Metabolomics
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Quantification and identification via accurate mass search with downstream processing and visualisation. Example input data: To download the data from the archive, check the box on the folder and click on the download button (arrow) on the top left. Download and unpack the "Metabolomics" data into a directory "Example_data/Metabolomics" next to this workflow inside your KNIME workspace.

External resources

  • Home of the OpenMS plugin
  • Example Data

Used extensions & nodes

Created with KNIME Analytics Platform version 4.7.1
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    Generic Workflow Nodes for KNIME

    Freie Universitaet Berlin, Universitaet Tuebingen, and the GenericWorkflowNodes Team

    Version 1.0.0

    gkn-team
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    KNIME Base Chemistry Types & Nodes Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.1

    knime
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    KNIME Base nodes Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.1

    knime
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    KNIME Excel Support Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.0

    knime
  • Go to item
    KNIME Interactive R Statistics Integration Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.0

    knime
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    KNIME Javasnippet Trusted extension

    KNIME AG, Zurich, Switzerland

    Version 4.7.0

    knime
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    OpenMS

    Version 2.7.0

    Openms Team profile image
    openms-team
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    RDKit Nodes Feature Trusted extension

    NIBR

    Version 4.7.0

    manuelschwarze
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